|
![]() |
||
Mapping the Cycle |
|||
| The Big Picture: Mapping Mutants to Conformations to Biochemical states | |||
|
This part is still WAY under construction. However, in case anybody cares, here's what I am billing as the 'Conformational Conundrum': the emerging picture of how cs mutants we have isolated are turning out to suppress one another, and how a collection of suppressors interact with each of the cs (and other 'archetype') mutants. The 'big picture' looks like this (the key is below).
The primary difference between the above the previous version (accessible via this LINK) is thatI have joined G680V with {L596S,P & L222F} and joined {T189I & V192F} with {N483S & Y494K & W501L}. Also, the newly discovered suppression of Y494K by G691T is indicated, and I have started distinguishing between mutants that have strong biological phenotypes on their own (written in black) and those that do not (written in white or outline font). Enjoy! Symbols: Gray circles represent archetypes, which are currently simply groups of mutants that I have lumped together based on any of the following criteria:
My dream is to one day merge some groups as needed and to correlate different genetic groupings with structural and biochemical states of the motor Gray arrows indicate suppression, i.e. L596S and L222F can suppress (and are suppressed by) delArink, E531Q and P536R. TRIANGLES indicate residues that suppress different gray circles depending on whether they mutate to LARGER residues (broad end of triangle; green arrows) or smaller residues (narrow end of the circle; orange arrows). The ELLIPSE indicates residues that, when changed toward MORE POSITIVE CHARGE (blue arrows), suppress different gray circle than when they mutate to negative charge (red arrows). Cyan rectangles indicate suppressors that act on more than one gray circle. The black 'anti' oval containing W501R indicates that it is the 'evil twin' of W501L--it occurs at the some amino acid, but conveys opposing properties. Caveats: Not all data has been confirmed, therefore subject to revision!
|